Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2824HWUQ
IGVFFI2824HWUQ
released
validated
Json view
File Set
IGVFDS8782BKBI
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1649
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1649_R2
buenrostro-bernstein:SS-LS_1649_R2
md5sum
a75eff59ee29bcc2d44710044c68f25c
Content MD5sum
dc2e696f9d4246a2fe48b1fb94231609
File Size
18 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1146_L3_SS-PKR-7_SS-V2-PLATE2-3rd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1649
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
320
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1494VRXC
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (37 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad