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INDEXED
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SequenceFile
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IGVFFI2791WXMP
IGVFFI2791WXMP
released
validated
Json view
File Set
IGVFDS0357HJRR
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day1_L1_R1
md5sum
95b81029a1f257278df768d0c6fccfd4
Content MD5sum
d89e858bf4e963e4f77153990539db0a
File Size
2.8 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C29D1-Pos1-C04_S25_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.86
Read Count
39628033
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0122NJDW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA