IGVFFI2780LXZE

released
validated
File Set
IGVFDS4786QNDV(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep2-FFrep1-BinA-PCRrep2_I1
md5sum
ed9454fec268ec744d81485b6691fdd1
Content MD5sum
d4824942685a742d4fdf10372266b5f9
File Size
15 MB
Submitted File Name
220228pPPIF-FFSample-6-D21-pPPIF-Amp-pPPIF-2-1-2-BinA_I1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
I1
Index
CAATAGTC:TGAC
Average Read Length
8
Read Count
1933158

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-10% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution