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INDEXED
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SequenceFile
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IGVFFI2775QXAW
IGVFFI2775QXAW
released
validated
Json view
File Set
IGVFDS4866EOBI
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 8
File Format
fastq
Content Type
reads
md5sum
9c08374dc044b2643359d85932f345e7
Content MD5sum
df4fbdb773ee3fa24d5bd5d0209e0edc
File Size
6.0 GB
Submitted File Name
igvf_010/nova1/igvf_010_B02_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
8
Flowcell ID
H7TLWDSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
168517796
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9053HKTX
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7280HGJL
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8559XZFU
yaml
seqspec
seqspec of IGVFFI1118SRPZ, IGVFFI2775QXAW
Ali Mortazavi, UCI
1.4 KB
validated