IGVFFI2750YBCT

preview
validated
1{
2    "@context": "/terms/",
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4    "@type": [
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9    "accession": "IGVFFI2750YBCT",
10    "aliases": [
11        "leif-ludwig:measurement2303408007_scATAC_R3_006"
12    ],
13    "assay_titles": [
14        "10x multiome with scMito-seq"
15    ],
16    "audit": {},
17    "award": {
18        "@id": "/awards/HG012076/",
19        "component": "mapping"
20    },
21    "checkfiles_version": "v17",
22    "content_md5sum": "77fdfe8ee82e586ba432f6d4280120e3",
23    "content_type": "reads",
24    "controlled_access": true,
25    "creation_timestamp": "2025-03-07T19:14:01.714198+00:00",
26    "externally_hosted": false,
27    "file_format": "fastq",
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35        "accession": "IGVFDS7125UUPF",
36        "assay_term": {
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38            "term_name": "single-cell ATAC-seq"
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40        "file_set_type": "experimental data",
41        "samples": [
42            {
43                "@id": "/primary-cells/IGVFSM1890BTQD/",
44                "@type": [
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47                    "Sample",
48                    "Item"
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50                "accession": "IGVFSM1890BTQD",
51                "classifications": [
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54                "sample_terms": [
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57                        "status": "released",
58                        "term_name": "peripheral blood mononuclear cell"
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60                ],
61                "status": "preview",
62                "summary": "Homo sapiens (male, 30 years) peripheral blood mononuclear cell",
63                "taxa": "Homo sapiens"
64            }
65        ],
66        "status": "preview",
67        "summary": "10x multiome with scMito-seq"
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70    "flowcell_id": "22JFNWLT4",
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75    "integrated_in": [],
76    "lab": {
77        "@id": "/labs/leif-ludwig/",
78        "title": "Leif Ludwig, MDC"
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83    "md5sum": "7f80a66f92b9912919bd941ad4341ad4",
84    "mean_read_length": 101,
85    "minimum_read_length": 101,
86    "quality_metrics": [],
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88    "read_names": [
89        "Read 2"
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92    "schema_version": "15",
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99        "status": "released",
100        "term_name": "Illumina NovaSeq X Plus"
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103    "status": "preview",
104    "submitted_by": {
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106        "title": "Ludwig Lab"
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108    "submitted_file_name": "/data/cephfs-1/scratch/groups/ludwig/IGVF/A5076_FASTQs_NEW/A5076/250228_LH00253_0210_A22JFNWLT4/A5076_hPBMC_2303408007_Multiome-ATAC_940_S1_L006_R3_001.fastq.gz",
109    "summary": "R3 reads from sequencing run 1",
110    "upload_status": "validated",
111    "uuid": "15fe7c14-c4c4-45ee-a247-4c5b560dd3c0"
112}