Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2749HUJJ
IGVFFI2749HUJJ
released
validated
Json view
File Set
IGVFDS9540QIQR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8844
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8844_R1
md5sum
f135e5a75996a83629372c14107f0cfa
Content MD5sum
bd3f281a23f88a9ecb033b1c06ce3048
File Size
15 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2290_L5_SS-PKR-178_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8844
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
313891
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5888ULVX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7656ULHH
yaml
seqspec
seqspec of IGVFFI2749HUJJ, IGVFFI4426ICGJ, IGVFFI8123WERC
Jason Buenrostro, Broad
1.3 KB
validated