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INDEXED
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SequenceFile
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IGVFFI2741WDZJ
IGVFFI2741WDZJ
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 7333
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7333_R2
md5sum
fa726f96460087f8b66c3512996c4dfc
Content MD5sum
560c04e0579158ea7e9a7985f5789d45
File Size
11 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1910_L5_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7333
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
187565660
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7549SZFK
yaml
seqspec
seqspec of IGVFFI1056SNKD, IGVFFI2741WDZJ
Jason Buenrostro, Broad
1.3 KB
validated