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IGVFFI2741HIJM

released
validated
File Set
IGVFDS0956TMWA(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 260
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2105_R2
bradley-bernstein:SS-LS_260_R2
buenrostro-bernstein:SS-LS_2105_R2
buenrostro-bernstein:SS-LS_260_R2
md5sum
f45559532ef88317ee3d4d50531c51f5
Content MD5sum
d1e33e5bd9ec8a8dcec7728dc18cd765
File Size
353 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-187_L2_SS-PKR-131_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
260
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
6809843

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.3 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
887 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2288NVQQ, IGVFFI2741HIJM
Jason Buenrostro, Broad
1.2 KB
validated