IGVFFI2734HGTI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1921IDBT(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G5_P052_L002_I2

md5sum

21e69eb98695c9cbde39e0f11046a042

Content MD5sum

f9ebb4dff8cb13a14aebbfb3bd8ede81

File Size

582 MB

Submitted File Name

Multiome_RNA_RP002_G5_L005_P052_S13_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

94157654

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5494QQKW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples