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INDEXED
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SequenceFile
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IGVFFI2720GOVL
IGVFFI2720GOVL
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2907ITTR
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 63
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX10-SC4_snATAC_S0_R1
md5sum
3f6e9dc4f88040b3d94ba705921107c6
Content MD5sum
7447a0d635fe7547fe74d2cd45d917a8
File Size
4.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX10-SC4/AHFFGGDSX2/XHLT1-POOL-XX10-SC4-ATAC_S6_L001_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
63
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
150014888
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5108TWAL
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 29.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 17 more samples