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IGVFFI2714LCIR

released
validated
File Set
IGVFDS7674GILZ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2342
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2342_R1
buenrostro-bernstein:SS-LS_2342_R1
md5sum
e3de076dda7f8e6a2ca8db5333c7edb0
Content MD5sum
9f549fd96bc3f58110f2ca9f6a4a8215
File Size
392 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-10_L2_SS-PKR-1_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2342
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
19399817

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad