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IGVFFI2681QKTX

released
validated
File Set
IGVFDS5295EBUX(CRISPR HiCAR integrating a non-targeting guide (sgRNA) library)
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-control-mouse-hl1-targeted-hicar-rep2-R1
md5sum
e37f9fbe662a626a5ce9c77a6b2f32f0
Content MD5sum
63f979151ff0922a7d431783a4df651b
File Size
1.1 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_mouse/crispra_hicar_mouse_fastq/HL_1_TA432_NT_2_noET1_ds.0e009e69cf5d47edba5da03d824fc6ee/HL_1_TA432_NT_2_noET1_S12_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
22713622

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HL-1 cell line, female, Mus musculus C57BL/6J transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
52 MB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke