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INDEXED
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SequenceFile
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IGVFFI2680GVSJ
IGVFFI2680GVSJ
released
validated
Json view
File Set
IGVFDS1180HGHV
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day18_L1_R1
md5sum
f2628f81a08d3788ad0d4b8487e72d4d
Content MD5sum
f02774f2bce1fbb12212c3192c418c40
File Size
3.2 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl46/20230918-3C39D18-Pos1-B05_S13_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
149.59
Read Count
48478231
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7858NBZK
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 18 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA