IGVFFI2666XDQF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9042EIOS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP025_G6_P070_L004_R1

md5sum

dcb5a4329d157a6cdaba074a1cb34404

Content MD5sum

fbe5b715d233c084bd610ee0e2a88755

File Size

10 GB

Submitted File Name

Multiome_RNA_RP025_G6_L006_P070_S26_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

118313526

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9856IYBQ

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples