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INDEXED
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SequenceFile
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IGVFFI2655ZCMP
IGVFFI2655ZCMP
released
validated
Json view
File Set
IGVFDS9836XZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7382
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7382_R1
md5sum
65cdc01cdc6dc199ba8bab5361419922
Content MD5sum
50784ca0ee93dfa9c342a61156d1dfe5
File Size
6.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1954_L1_SS-PKR-503_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7382
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
152761682
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9232VQYX
Tissue
left cerebral cortex
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 503)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0952ONSE
yaml
seqspec
seqspec of IGVFFI2655ZCMP, IGVFFI5100XZJS
Jason Buenrostro, Broad
1.3 KB
validated