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INDEXED
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SequenceFile
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IGVFFI2640BGBT
IGVFFI2640BGBT
released
validated
Json view
File Set
IGVFDS6781RGTM
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8384
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8384_R2
md5sum
94ae51f052a911ea690236e1a18f95a2
Content MD5sum
0a79d80f93b1143fc0b2b5ebed4ea3fa
File Size
5.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2254_L5_SS-PKR-604_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8384
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
100785343
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6880XEAH
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4990ZQDX
yaml
seqspec
seqspec of IGVFFI2730WKVI, IGVFFI2640BGBT
Jason Buenrostro, Broad
1.3 KB
validated