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SequenceFile
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IGVFFI2612WVNG
IGVFFI2612WVNG
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9636SNGC
(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 77
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX11-SC1_snATAC_S4_R3
md5sum
d3c07846321b52d63ae1fe82134e9277
Content MD5sum
21fae1a82d561200e7570584c63d6cc4
File Size
11 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX11-SC1/AHY3H2DSX2_ATAC/XHLT1-POOL-XX11-SC1-ATAC_S7_L003_R3_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
77
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
227713336
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8525WUDY
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 62.0 years) peripheral blood mononuclear cell; ... and 17 more samples