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INDEXED
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SequenceFile
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IGVFFI2611OCPU
IGVFFI2611OCPU
released
validated
Json view
File Set
IGVFDS4429VWLZ
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day12_L6_R1
md5sum
dfc965dc5a7665249e602a5b2428ac6d
Content MD5sum
76e743b2c97c65f61f219094650c88cc
File Size
3.1 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D12-Pos1-C11_S32_L006_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.76
Read Count
44186304
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3009NMJU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA