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INDEXED
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SequenceFile
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IGVFFI2603RHCO
IGVFFI2603RHCO
released
validated
Json view
File Set
IGVFDS8346OZIZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1459
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1459_R1
buenrostro-bernstein:SS-LS_1459_R1
md5sum
97335a6688b2fa34e79c9e8f4c014fe1
Content MD5sum
ca2df2b5dc0a61c7e5b1bfd57144498a
File Size
3.3 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1148_L1_SS-PKR-8_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1459
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
103
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1054BSTI
PrimaryCell
bone marrow
Homo sapiens (male, 26 years) bone marrow cell (cellular sub pool: SS-PKR 8)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated