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IGVFFI2590TULH

released
validated
File Set
IGVFDS1427CODJ(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp18_atac_10x1_NGS1_r2
md5sum
6b60ad5c9295d31ee28d820a6a05b2ae
Content MD5sum
4300bfef5383c84a7f86a110def89297
File Size
13 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf18/ATAC/ATAC1-CMAS23A_S33_L006_R2_001.fastq.gz
Checkfiles Version
v14
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22FL7YLT4
Lane
1
Sequencing Kit
NovaSeq X Series 25B Reagent Kit
Illumina Read Type
R2
Average Read Length
24
Read Count
724414038

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
4.9 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2427ACWP, IGVFFI2590TULH, IGVFFI4076GAUO, IGVFFI7773BPEF
Ansuman Satpathy, Stanford
1.4 KB
validated