IGVFFI2579JPJV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3955MWJB(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X033_G5_P034_L002_I1

md5sum

d67c334b68e40f89d6cb458a31849640

Content MD5sum

0c7970bda8d4e3392a257d4079d72984

File Size

1.1 GB

Submitted File Name

Multiome_RNA_X033_G5_L005_P034_S21_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

185584512

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1587HABQ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue; ... and 10 more samples