IGVFFI2571GXGO

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7943AOIF(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_CAAC-THP1-BioRep2-FFrep2-BinA-PCRrep2_R1
md5sum
4908309ec53e56f50d1926616cf77398
Content MD5sum
8a5ea6236dead500430deb3ed7c871bf
File Size
26 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C11-Amp_PPIF_5splicesite-BioRep2-FFrep2-BinA-PCRrep2_S883_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R1
Index
GTCTGATG:TATGAGTA
Average Read Length
151
Read Count
1208074

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution