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IGVFFI2549NCMF

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9590YCER(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 472
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX6-SC1_snATAC_S0_R2
md5sum
5cd518fa66ed673b6060c36cc083efe9
Content MD5sum
af0e5c71ef2f6f1f80b05c0484c78965
File Size
3.9 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX6-SC1/AH2YMLDSX3_ICJY04/XHLT1-POOL-XX6-SC1-ATAC_S5_L004_R2_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
472
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
229375056

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 18.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF