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IGVFFI2549JRJP

released
validated
File Set
IGVFDS5682MSPJ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1714
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1714_R1
buenrostro-bernstein:SS-LS_1714_R1
md5sum
d93127b2475d4992fcf891cfcb33f8fa
Content MD5sum
37bc6393c86f996a881799fdd659b0e8
File Size
908 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1115_L4_SS-PKR-5_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1714
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
43853000

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad