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SequenceFile
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IGVFFI2548YMLF
IGVFFI2548YMLF
released
validated
Json view
File Set
IGVFDS9128AYFE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4309
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4309_R1
md5sum
4e4de6d2e63be90aeb23b6dcbcfce426
Content MD5sum
7def7213def6404a28f1697da538092b
File Size
4.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-568_L3_SS-PKR-168_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4309
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
72297974
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2945WQNS
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 168)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5429JZDS
yaml
seqspec
seqspec of IGVFFI2548YMLF, IGVFFI2161CUMY, IGVFFI9308MGKQ
Jason Buenrostro, Broad
1.3 KB
validated