IGVFFI2545LEUY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2147TNVV(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X053_G1_P071_L007_R2

md5sum

7cf57c4d527492e6b0a032d846af6555

Content MD5sum

4469876df17a90e8f4e2f043de974fcc

File Size

2.2 GB

Submitted File Name

Multiome_ATAC_X053_G1_L001_P071_S45_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

126196281

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5769JWBA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples