IGVFFI2544WJNK

released

validated

File Set

IGVFDS1135XOEU(quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jay-shendure:sc_rep_devCRE_mEBs_mBC_pdT_rep2B_10Xlane1_R1

md5sum

375f25ecda5a70f482b32a411e67a1f1

Content MD5sum

143d9628da0f32a36d6810261d7f08f7

File Size

837 MB

Submitted File Name

/net/shendure/vol8/projects/JBL/GEO_sc_rep_fastqs_nobackup/geo_submission_20221108/sc_rep_devCRE_mEBs/sc_rep_mEB_series_mBC_pdT_rep2B_lane1_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NextSeq 550

Sequencing Run

Flowcell ID

H3JVCBGXM

Lane

Sequencing Kit

NextSeq 500/550 High-Output v2.5 Kit

Illumina Read Type

Average Read Length

Read Count

35541832

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM0317RLIP

InVitroSystem

mouse embryonic stem cell

mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10Xlane1), male, Mus musculus WD44 transfected with a reporter library