IGVFFI2531IHCY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3851BRIR(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:Jurkat_Stim-IL2RA_prom-BioRep1-FFRep2-BinC-PCRRep1_I1

md5sum

bedb2ab11dfbac965ae1cd6838cd3107

Content MD5sum

4df9d7454afd7697f63c2339666179c5

File Size

1.5 MB

Submitted File Name

Jurkat_Stim-IL2RA_prom-BioRep1-FFRep2-PCRRep1-BinC_S7_I1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Illumina Read Type

Index

AACGCATT:TTGT

Average Read Length

Read Count

178950

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM8079DJVX

InVitroSystem

Jurkat

Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 51-75% expression of IL2RA) treated with 100 ng/mL phorbol 13-acetate 12-myristate for 24 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 24 hours, modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library