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IGVFFI2519YUKX

released
validated
File Set
IGVFDS8001MFIY(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2432
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2432_R1
buenrostro-bernstein:SS-LS_2432_R1
md5sum
df64539981adca606efb3bbfc5550518
Content MD5sum
38621b1d82e2c7a5c8581744694bdeb0
File Size
624 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-4_L3_SS-PKR-1_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2432
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
31594544

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad