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INDEXED
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SequenceFile
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IGVFFI2508HISW
IGVFFI2508HISW
released
validated
Json view
File Set
IGVFDS5549HQMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 975
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_975_R1
md5sum
c26f0d39c57bc9459523123c0920cb8b
Content MD5sum
69a1858fc8a633e901ec18c4d7c40b33
File Size
1.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-946_L2_SS-PKR-179_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
975
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
32598992
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0278QWHE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 179)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0225MZKX
yaml
seqspec
seqspec of IGVFFI2508HISW, IGVFFI2269XWNP, IGVFFI8975SZFZ
Jason Buenrostro, Broad
1.3 KB
validated