Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2505MQBN
IGVFFI2505MQBN
released
validated
Json view
File Set
IGVFDS6090OHVV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4092
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4092_R1
md5sum
5639e4ca48f9e41b7918c5ee5cc7a15f
Content MD5sum
8604c2be59a88a39ae47f8f3dcb58cca
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-735_L3_SS-PKR-181_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4092
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
22513545
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6240YVGY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 181)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3737VVEU
yaml
seqspec
seqspec of IGVFFI2505MQBN, IGVFFI8430JCMK, IGVFFI6114YXKE
Jason Buenrostro, Broad
1.3 KB
validated