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INDEXED
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SequenceFile
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IGVFFI2504OJNS
IGVFFI2504OJNS
released
validated
Json view
File Set
IGVFDS7535KDYJ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8345
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8345_R1
md5sum
b0548a4eaec4f12ab9b0cd24fb92c4bf
Content MD5sum
49be550e28072d082d5507d98dd2476f
File Size
2.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2231_L8_SS-PKR-574_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8345
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
62804302
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5455KAQH
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2120XIOS
yaml
seqspec
seqspec of IGVFFI2504OJNS, IGVFFI9369MSQP
Jason Buenrostro, Broad
1.3 KB
validated