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IGVFFI2477AHZQ

released
validated
File Set
IGVFDS1267CSNQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2444
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2444_R1
buenrostro-bernstein:SS-LS_2444_R1
md5sum
a449bd7facc16e34d2932f1078908674
Content MD5sum
a3e3e432343ad4f3fce0a9894df95d24
File Size
492 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-16_L3_SS-PKR-2_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2444
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
25048268

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad