IGVFFI2475XUUD

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6915EFKE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G4_P062_L005_I2

md5sum

7928ced34f4eccc1049911bf45b22aa8

Content MD5sum

c4d240f7dca9c5de349785318254ee7f

File Size

520 MB

Submitted File Name

Multiome_RNA_RP013_G4_L004_P062_S24_L005_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

78747245

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1576QCMO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples