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INDEXED
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SequenceFile
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IGVFFI2467WVXV
IGVFFI2467WVXV
released
validated
Json view
File Set
IGVFDS3991RWMW
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1633
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1633_R2
buenrostro-bernstein:SS-LS_1633_R2
md5sum
7feaf241ead841771164fd8277dea2c7
Content MD5sum
20c3e7e4b07beac6976e30f577308c74
File Size
60 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1130_L3_SS-PKR-6_SS-V2-PLATE2-1st-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1633
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
1135
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1036KMAA
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (49 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad