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INDEXED
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SequenceFile
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IGVFFI2467WSER
IGVFFI2467WSER
released
validated
Json view
File Set
IGVFDS1157ISDS
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:ys3b_snRNA_R1
md5sum
39621f6ee1ec995fde17584bc693e610
Content MD5sum
ca3508899bae869e0eadd68d538acce8
File Size
22 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/multiome/gex/IGVF2GEX-B_S2_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
101
Read Count
331235516
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8294LIUF
MultiplexedSample
fibroblast
multiplexed sample: Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day; Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days; ... and 2 more samples
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8101TQYZ
yaml
seqspec
seqspec of IGVFFI2467WSER, IGVFFI9810BCAJ
Kathrin Plath, UCLA
1.4 KB
validated