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SequenceFile
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IGVFFI2465ZXCH
IGVFFI2465ZXCH
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1887NZWO
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP025_G5_P070_L004_I2
md5sum
f08f62279d224e8d5b5658c15c1a41c4
Content MD5sum
21362de49f4d0aa266933b5f1b31214f
File Size
990 MB
Submitted File Name
Multiome_RNA_RP025_G5_L005_P070_S25_L004_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19RTCA4LE
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
145288501
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4968PVUL
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples