IGVFFI2457FEZA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1447ZIXP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G2_P060_L007_I1

md5sum

a13d75f41a5ee283f197da592e3d4f51

Content MD5sum

9e07daef19baa29c3c9d69bd932ab5f4

File Size

575 MB

Submitted File Name

Multiome_RNA_RP012_G2_L002_P060_S34_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

98751093

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3226MLFV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples