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IGVFFI2453FDMJ

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validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7729SUIF(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:sequence_file-teloHAEC_2kG_library-NovaSeq2-scRNAseq_2kG_2PMDox2_4_c_TGGATTGC_L001_R1_001.fastq.gz
md5sum
85470def37af7a7fe47e7e55f77cfda2
Content MD5sum
e2590cae01d994ac0b0b600363dd49c7
File Size
3.6 GB
Submitted File Name
/oak/stanford/groups/engreitz/Users/kangh/TeloHAEC_Perturb-seq_2kG/210616_Broad_fastq/scRNAseq_2kG_2PMDox2_4_c_TGGATTGC_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
32
Read Count
163672497

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford