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INDEXED
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SequenceFile
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IGVFFI2447XJXR
IGVFFI2447XJXR
released
validated
Json view
File Set
IGVFDS2676HFQT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4004
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4004_R1
md5sum
a01ac7ff63aa39ebcfcc0028ff5e08a6
Content MD5sum
3d9bda7de4434cc69276655228c6b786
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-720_L1_SS-PKR-173_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4004
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
24511055
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7503LASU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9413WLHV
yaml
seqspec
seqspec of IGVFFI2447XJXR, IGVFFI2025NOYK, IGVFFI2660PKHA
Jason Buenrostro, Broad
1.3 KB
validated