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IGVFFI2447KHFY

released
validated
File Set
IGVFDS5523WWKM(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-APC-SHARE-02-5k-RNA.R1.fastq.gz
md5sum
7f6ba02623337836e353750115496bf7
Content MD5sum
070e3416bad82aef260edaf48ba72d55
File Size
3.0 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/APC-SHARE-02-5k-RNA.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
APC-SHARE-02-5k_P1.74
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
75565782

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6J colon tissue

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
10 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2447KHFY, IGVFFI8022FSUK, IGVFFI6296YCUD
Jason Buenrostro, Broad
1.2 KB
validated