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IGVFFI2437FQNY

released
validated
File Set
IGVFDS6675BDQA(scATAC-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
jay-shendure:scATAC_mEBs_rep1_day21_10XlaneB_reseq_R2
md5sum
cd42ba1131082782da64c0611ba47421
Content MD5sum
036f5292814c1954c44a80f0e231105e
File Size
3.6 GB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/scATAC_mEBs/scATAC_mEBs_d21_crispri_rep1_lane_b_reseq_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
2
Flowcell ID
H3HFJBGXG
Lane
1
Sequencing Kit
NextSeq 500/550 High-Output v2.5 Kit
Illumina Read Type
R2
Average Read Length
50
Read Count
104155221

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneB), male, Mus musculus WD44

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jay Shendure, UW
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8821SFDV, IGVFFI4136YACE, IGVFFI0014UJDI, IGVFFI2437FQNY
Jay Shendure, UW
851 B
validated

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Jay Shendure, UW