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IGVFFI2435ZPVA

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4257XYUS(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 540
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX8-SC1_snATAC_S4_R1
md5sum
38b89818c0d6bd5fb68af638749ce61b
Content MD5sum
103dd9cad14b3f3920467e3b8abcae5a
File Size
5.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX8-SC1/BH2VM7DSX3/XHLT1-POOL-XX8-SC1-ATAC_S13_L004_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
540
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
183442364

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 48.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF