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IGVFFI2434VACB

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9120JYMC(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 218
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC3_snATAC_S0_R2
md5sum
ee5a3d2ffefa8f10919dd525ed68eaee
Content MD5sum
50c1bdf9f8f34a5ab4ce85775fd218ef
File Size
4.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX15-SC3/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX15-SC3-ATAC_S6_L001_R2_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
218
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
238617825

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 34.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 23.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF