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INDEXED
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SequenceFile
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IGVFFI2424JMXS
IGVFFI2424JMXS
released
validated
Json view
File Set
IGVFDS9196PDRB
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day9_L1_R1
md5sum
76bdd144a4f7fe335726575eaaf8b46a
Content MD5sum
92f16a1f6df959ce460ebb61faa7d878
File Size
3.3 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D9-Pos1-C09_S30_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.84
Read Count
45572953
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3665LIKW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA