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INDEXED
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SequenceFile
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IGVFFI2423ASTV
IGVFFI2423ASTV
released
validated
Json view
File Set
IGVFDS3387GMPK
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P009-R1
md5sum
890d4e2315306cdf562d1e577bddd2e0
Content MD5sum
dbdf8b73abd7c907cdace406b8f79e09
File Size
5.2 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool9.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
36307921
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5631FWFB
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
5.9 GB
validated
IGVFFI6961BSUP
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
5.6 GB
validated