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INDEXED
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SequenceFile
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IGVFFI2421XAFJ
IGVFFI2421XAFJ
released
validated
Json view
File Set
IGVFDS3548TJJM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8510
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8510_R1
md5sum
c57dc51e726d292dbaf1b93e91b00848
Content MD5sum
ba31229e565dad669bee6fa6a407f1bf
File Size
685 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2340_L1_SS-PKR-206_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8510
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15236800
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6043MNJX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4800ENWN
yaml
seqspec
seqspec of IGVFFI2421XAFJ, IGVFFI2486MIKX, IGVFFI6383GYGN
Jason Buenrostro, Broad
1.3 KB
validated