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IGVFFI2412JMAL

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9328ATOD(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 248
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC3_snATAC_S2_R1
md5sum
86051e28ffe1166bb884990c52c0d819
Content MD5sum
2acf7670d817658c4ef84620080d5b48
File Size
9.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX16-SC3/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX16-SC3-ATAC_S10_L003_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
248
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
288518988

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF