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INDEXED
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SequenceFile
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IGVFFI2410UOXP
IGVFFI2410UOXP
released
validated
Json view
File Set
IGVFDS0313KPRX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 7399
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7399_R1
md5sum
0583b2e5a74f086777a7319d6adfd13a
Content MD5sum
b453b0bb9e5700605e2ebdfa138d5f47
File Size
8.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1958_L8_SS-PKR-502_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7399
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
194432391
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6577YGTD
Tissue
left cerebral cortex
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5596OJWV
yaml
seqspec
seqspec of IGVFFI2410UOXP, IGVFFI7092LWDD
Jason Buenrostro, Broad
1.3 KB
validated