Home

IGVFFI2404VJAO

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5526TAEF(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 552
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX8-SC3_snATAC_S0_R1
md5sum
0c3ae236199f300eb7d7a7fb98c7f67c
Content MD5sum
254953f0c2bc78503429c8cc56e2105f
File Size
5.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX8-SC3/AH2YMLDSX3_ICJY04/XHLT1-POOL-XX8-SC3-ATAC_S15_L004_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
552
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
172946092

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 26.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 26.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF